STRINGSTRING
RSAG_00163 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00163" - LPXTG-containing cell wall anchor protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00163LPXTG-containing cell wall anchor protein (686 aa)    
Predicted Functional Partners:
RSAG_00166
UPF0291 protein RSAG_00166 (73 aa)
              0.562
RSAG_00165
5-formyltetrahydrofolate cyclo-ligase (185 aa)
              0.562
proA
Glutamyl-gamma-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate (422 aa)
              0.562
RSAG_00162
Uncharacterized protein (299 aa)
              0.532
proB
Gamma-glutamyl kinase ; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (285 aa)
              0.410
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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