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RSAG_00170 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00170" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00170Uncharacterized protein (336 aa)    
Predicted Functional Partners:
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (164 aa)
   
 
  0.948
RSAG_00173
Sporulation protein YqfC (104 aa)
              0.720
RSAG_00172
Sporulation protein YqfD (394 aa)
              0.720
RSAG_00165
5-formyltetrahydrofolate cyclo-ligase (185 aa)
 
          0.700
proB
Gamma-glutamyl kinase ; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (285 aa)
              0.606
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (119 aa)
 
          0.595
trmB
tRNA(m7G46)-methyltransferase ; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (221 aa)
     
      0.590
rlmH
rRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (159 aa)
 
          0.577
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (755 aa)
 
 
 
  0.536
hflX
GTP-binding protein HflX ; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (411 aa)
   
        0.534
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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