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rlmH protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"rlmH" - rRNA in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rlmHrRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (159 aa)    
Predicted Functional Partners:
RSAG_00174
Uncharacterized protein (178 aa)
              0.724
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (119 aa)
   
   
  0.719
RSAG_00176
Uncharacterized protein (363 aa)
              0.690
RSAG_00177
Uncharacterized protein (878 aa)
              0.676
proB
Gamma-glutamyl kinase ; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (285 aa)
         
  0.616
rplU
50S ribosomal protein L21 ; This protein binds to 23S rRNA in the presence of protein L20 (104 aa)
 
     
  0.608
RSAG_00173
Sporulation protein YqfC (104 aa)
              0.602
RSAG_00172
Sporulation protein YqfD (394 aa)
              0.602
proA
Glutamyl-gamma-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate (422 aa)
   
   
  0.594
RSAG_00170
Uncharacterized protein (336 aa)
 
          0.577
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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