STRINGSTRING
RSAG_00176 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00176" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00176Uncharacterized protein (363 aa)    
Predicted Functional Partners:
RSAG_00177
Uncharacterized protein (878 aa)
              0.833
RSAG_01731
Uncharacterized protein (85 aa)
   
          0.774
RSAG_00764
Stage III sporulation protein AG (110 aa)
   
          0.750
RSAG_00012
Uncharacterized protein (217 aa)
   
          0.714
rlmH
rRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (159 aa)
              0.690
RSAG_02658
Uncharacterized protein (122 aa)
   
          0.674
RSAG_00174
Uncharacterized protein (178 aa)
              0.586
RSAG_01037
Oxaloacetate decarboxylase gamma chain (234 aa)
   
          0.566
RSAG_00178
Undecaprenyl pyrophosphate phosphatase ; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin (301 aa)
              0.562
RSAG_03326
Uncharacterized protein (291 aa)
   
          0.532
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (9%) [HD]