STRINGSTRING
RSAG_00190 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00190" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00190Uncharacterized protein (413 aa)    
Predicted Functional Partners:
RSAG_00353
Uncharacterized protein (387 aa)
 
          0.573
RSAG_00189
Uncharacterized protein (178 aa)
              0.559
RSAG_04720
YggS family pyridoxal phosphate enzyme (192 aa)
 
          0.514
serC
Phosphohydroxythreonine aminotransferase ; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (360 aa)
 
          0.508
RSAG_03289
Uncharacterized protein (246 aa)
              0.438
RSAG_02738
Uncharacterized protein (327 aa)
              0.438
RSAG_00980
Uncharacterized protein (163 aa)
              0.438
RSAG_00170
Uncharacterized protein (336 aa)
              0.438
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (164 aa)
              0.438
hisG
ATP phosphoribosyltransferase ; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N’-(5’-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity (215 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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