STRINGSTRING
RSAG_00192 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00192" - M20/DapE family protein YgeY in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00192M20/DapE family protein YgeY (436 aa)    
Predicted Functional Partners:
RSAG_00193
Uncharacterized protein (397 aa)
 
 
  0.975
RSAG_00202
Uncharacterized protein (999 aa)
 
 
    0.947
RSAG_00191
Diaminopropionate ammonia-lyase (409 aa)
 
   
  0.942
RSAG_00203
Uncharacterized protein (443 aa)
 
 
    0.919
RSAG_01299
Dihydropyrimidinase (461 aa)
 
   
  0.908
RSAG_01300
Uncharacterized protein (223 aa)
 
          0.843
RSAG_03175
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (333 aa)
   
 
  0.834
RSAG_02565
Acetylornithine aminotransferase (405 aa)
   
 
  0.821
RSAG_02184
Acetylornithine aminotransferase (396 aa)
   
 
  0.821
argG
Citrulline--aspartate ligase (408 aa)
   
  0.821
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (14%) [HD]