STRINGSTRING
RSAG_00200 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00200" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00200Uncharacterized protein (166 aa)    
Predicted Functional Partners:
RSAG_00943
Electron transport complex subunit C ; Part of a membrane complex involved in electron transport (438 aa)
 
   
  0.902
RSAG_02335
Electron transport complex subunit C ; Part of a membrane complex involved in electron transport (444 aa)
 
   
  0.897
RSAG_00201
Selenium-dependent molybdenum hydroxylase 1 (860 aa)
 
          0.880
RSAG_00941
Electron transport complex subunit G ; Part of a membrane complex involved in electron transport (202 aa)
 
   
  0.870
RSAG_00939
Electron transport complex subunit A ; Part of a membrane complex involved in electron transport (191 aa)
 
   
  0.862
RSAG_00942
Electron transport complex subunit D ; Part of a membrane complex involved in electron transport (325 aa)
 
   
  0.855
RSAG_00940
Electron transport complex subunit E ; Part of a membrane complex involved in electron transport (237 aa)
 
   
  0.854
RSAG_01769
Uncharacterized protein (451 aa)
 
   
  0.756
RSAG_00072
Uncharacterized protein (160 aa)
 
          0.515
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (215 aa)
   
   
  0.453
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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