STRINGSTRING
RSAG_00222 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00222" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00222Uncharacterized protein (351 aa)    
Predicted Functional Partners:
RSAG_00882
Uncharacterized protein (253 aa)
 
          0.773
RSAG_00883
Solute-sodium symporter (SSS) family transporter (492 aa)
   
          0.747
RSAG_00885
Uncharacterized protein (280 aa)
 
          0.610
RSAG_03412
Uncharacterized protein (291 aa)
   
          0.572
RSAG_04727
Uncharacterized protein (187 aa)
              0.493
RSAG_00223
No annotation available (61 aa)
              0.493
RSAG_00221
Uncharacterized protein (65 aa)
              0.491
RSAG_00220
Uncharacterized protein (133 aa)
              0.491
RSAG_00714
Uncharacterized protein (125 aa)
   
          0.476
RSAG_01037
Oxaloacetate decarboxylase gamma chain (234 aa)
   
          0.450
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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