STRINGSTRING
RSAG_00228 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00228" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00228Uncharacterized protein (635 aa)    
Predicted Functional Partners:
RSAG_01898
Uncharacterized protein (353 aa)
   
          0.777
RSAG_02393
Uncharacterized protein (362 aa)
   
          0.776
RSAG_02914
Uncharacterized protein (597 aa)
   
          0.755
RSAG_00508
Uncharacterized protein (673 aa)
   
          0.737
RSAG_03121
Uncharacterized protein (484 aa)
   
          0.734
RSAG_00837
Sigma-E processing peptidase SpoIIGA (285 aa)
   
          0.732
RSAG_03264
Uncharacterized protein (752 aa)
   
          0.718
RSAG_02120
Uncharacterized protein (730 aa)
   
          0.712
RSAG_02628
Uncharacterized protein (415 aa)
   
          0.707
RSAG_00848
Uncharacterized protein (661 aa)
   
          0.705
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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