STRINGSTRING
RSAG_00234 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00234" - No annotation available in Ruminococcus sp. 5139BFAA
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00234No annotation available (323 aa)    
Predicted Functional Partners:
ligA
Polydeoxyribonucleotide synthase [NAD(+)] ; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (614 aa)
 
 
    0.951
metA
Homoserine O-transsuccinylase (310 aa)
              0.813
RSAG_00112
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (304 aa)
 
  0.797
RSAG_00013
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (341 aa)
 
  0.776
RSAG_01390
Uncharacterized protein (233 aa)
 
  0.742
RSAG_00696
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (349 aa)
 
  0.740
RSAG_01288
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (299 aa)
 
  0.730
RSAG_00374
Elongation factor P (185 aa)
 
      0.697
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (441 aa)
 
   
  0.692
RSAG_00005
RsmD family RNA methyltransferase (189 aa)
 
        0.679
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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