STRINGSTRING
RSAG_00264 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00264" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00264Uncharacterized protein (41 aa)    
Predicted Functional Partners:
RSAG_00263
Uncharacterized protein (225 aa)
              0.859
RSAG_00265
CRISPR type III-a/mtube-associated protein csm6 (438 aa)
              0.595
RSAG_00266
No annotation available (43 aa)
              0.520
RSAG_00262
Uncharacterized protein (351 aa)
              0.515
RSAG_00261
Uncharacterized protein (510 aa)
              0.515
RSAG_00260
Uncharacterized protein (393 aa)
              0.482
cas1
CRISPR-associated endonuclease Cas1 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (333 aa)
              0.459
RSAG_04730
CRISPR-associated endoribonuclease Cas2 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (64 aa)
              0.459
RSAG_00259
Uncharacterized protein (152 aa)
              0.406
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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