STRINGSTRING
RSAG_00272 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00272" - CRISPR type III-a/mtube-associated protein csm2 in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00272CRISPR type III-a/mtube-associated protein csm2 (131 aa)    
Predicted Functional Partners:
RSAG_00274
CRISPR-associated endoribonuclease cas6 (246 aa)
 
          0.972
RSAG_00273
CRISPR-associated protein cas10/csm1, subtype III-a/mtube (796 aa)
 
          0.972
RSAG_00271
CRISPR type III-a/mtube-associated ramp protein csm3 (221 aa)
 
          0.967
RSAG_00270
CRISPR type III-a/mtube-associated ramp protein csm4 (306 aa)
 
          0.955
RSAG_00269
CRISPR type III-a/mtube-associated ramp protein csm5 (374 aa)
 
          0.955
RSAG_04730
CRISPR-associated endoribonuclease Cas2 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (64 aa)
 
          0.869
RSAG_00265
CRISPR type III-a/mtube-associated protein csm6 (438 aa)
 
          0.869
cas1
CRISPR-associated endonuclease Cas1 ; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (333 aa)
 
          0.849
RSAG_00275
No annotation available (50 aa)
              0.515
RSAG_01266
Uncharacterized protein (477 aa)
   
          0.514
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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