STRINGSTRING
RSAG_00300 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00300" - No annotation available in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00300No annotation available (198 aa)    
Predicted Functional Partners:
RSAG_00301
Uncharacterized protein (231 aa)
 
          0.952
RSAG_04734
Uncharacterized protein (579 aa)
          0.950
RSAG_00302
Uncharacterized protein (409 aa)
 
          0.918
RSAG_00303
Uncharacterized protein (233 aa)
 
          0.882
RSAG_02030
Uncharacterized protein (345 aa)
   
          0.778
RSAG_02031
Uncharacterized protein (228 aa)
   
          0.771
RSAG_02029
Uncharacterized protein (227 aa)
   
          0.741
RSAG_00304
Excisionase family DNA binding domain-containing protein (61 aa)
              0.659
RSAG_00305
Uncharacterized protein (119 aa)
 
          0.589
RSAG_02028
Uncharacterized protein (602 aa)
 
       
0.524
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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