STRINGSTRING
RSAG_00331 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00331" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00331Uncharacterized protein (1380 aa)    
Predicted Functional Partners:
RSAG_00326
Uncharacterized protein (235 aa)
 
          0.890
RSAG_00321
Uncharacterized protein (329 aa)
 
          0.810
RSAG_00307
SrtB family sortase (257 aa)
          0.809
RSAG_00317
Uncharacterized protein (470 aa)
 
          0.809
RSAG_00316
Uncharacterized protein (257 aa)
 
          0.809
RSAG_00315
Uncharacterized protein (287 aa)
 
          0.809
RSAG_00318
Uncharacterized protein (109 aa)
 
          0.808
RSAG_00312
Uncharacterized protein (118 aa)
 
          0.793
RSAG_00306
Uncharacterized protein (591 aa)
 
          0.790
RSAG_00308
Uncharacterized protein (134 aa)
 
          0.749
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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