STRINGSTRING
RSAG_00333 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00333" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00333Uncharacterized protein (275 aa)    
Predicted Functional Partners:
RSAG_00332
ParB-like partition protein (315 aa)
 
 
  0.985
RSAG_03323
ParB-like partition protein (324 aa)
 
  0.962
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (451 aa)
 
 
  0.784
RSAG_03329
ParB-like partition protein (131 aa)
 
 
  0.702
RSAG_03220
Uncharacterized protein (312 aa)
 
   
  0.622
RSAG_00441
Uncharacterized protein ; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules (317 aa)
 
   
  0.621
RSAG_03366
Uncharacterized protein (497 aa)
   
 
    0.617
RSAG_03239
Uncharacterized protein (521 aa)
   
 
    0.617
RSAG_02913
Uncharacterized protein (306 aa)
   
 
    0.617
RSAG_01150
Uncharacterized protein (217 aa)
   
 
  0.610
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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