STRINGSTRING
RSAG_00338 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00338" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00338Uncharacterized protein (306 aa)    
Predicted Functional Partners:
RSAG_00612
Uncharacterized protein (261 aa)
  0.995
RSAG_01673
Uncharacterized protein (272 aa)
  0.994
RSAG_01668
Methylmalonyl-CoA mutase domain-containing protein (211 aa)
   
    0.994
RSAG_01672
Methanosarcina family methyltransferase cognate corrinoid protein (211 aa)
   
    0.990
RSAG_02337
Methylenetetrahydrofolate reductase (292 aa)
 
  0.990
RSAG_03002
Uncharacterized protein (413 aa)
       
  0.851
RSAG_02354
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (437 aa)
       
  0.851
RSAG_01848
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (427 aa)
       
  0.851
RSAG_01646
Methionine--tRNA ligase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (652 aa)
     
 
  0.811
RSAG_03295
S-adenosylmethionine synthase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (393 aa)
   
 
  0.785
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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