STRINGSTRING
RSAG_00397 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00397" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00397Uncharacterized protein (205 aa)    
Predicted Functional Partners:
RSAG_02125
TDP-4-keto-6-deoxy-D-glucose transaminase (376 aa)
   
  0.813
RSAG_00729
Uncharacterized protein (157 aa)
 
            0.779
RSAG_02123
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
   
 
  0.745
RSAG_01009
dTDP-4-dehydrorhamnose 3,5-epimerase (202 aa)
   
 
  0.745
RSAG_03011
dTDP-glucose 4,6-dehydratase (342 aa)
   
 
  0.709
RSAG_01011
dTDP-glucose 4,6-dehydratase (339 aa)
   
 
  0.709
RSAG_01900
Serine O-acetyltransferase (308 aa)
   
 
  0.662
RSAG_03164
Uncharacterized protein (560 aa)
   
 
  0.632
glmM
Phosphoglucosamine mutase ; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (448 aa)
   
 
  0.632
RSAG_04685
Uncharacterized protein (576 aa)
   
 
  0.632
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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