STRINGSTRING
RSAG_00410 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00410" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00410Uncharacterized protein (423 aa)    
Predicted Functional Partners:
RSAG_00409
Uncharacterized protein (559 aa)
 
    0.992
RSAG_02454
Uncharacterized protein (145 aa)
 
 
    0.865
RSAG_00361
Uncharacterized protein (1414 aa)
   
 
    0.774
RSAG_01035
Sodium ion-translocating decarboxylase, beta subunit (382 aa)
       
    0.742
RSAG_01036
Uncharacterized protein (122 aa)
       
    0.664
RSAG_01038
Uncharacterized protein (478 aa)
       
    0.618
RSAG_00412
Uncharacterized protein (588 aa)
              0.467
RSAG_00411
Uncharacterized protein (604 aa)
              0.467
RSAG_02582
Uncharacterized protein (176 aa)
   
          0.446
RSAG_00073
Uncharacterized protein (658 aa)
   
          0.442
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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