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RSAG_00413 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00413" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00413Uncharacterized protein (595 aa)    
Predicted Functional Partners:
RSAG_00414
TIGR00268 family protein (282 aa)
              0.862
RSAG_00633
Peptidase M ; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (291 aa)
 
   
  0.755
RSAG_01228
DNA polymerase I (849 aa)
 
   
  0.722
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (689 aa)
   
   
  0.695
RSAG_00715
DNA topoisomerase (734 aa)
   
   
  0.695
RSAG_02866
Peptidase M ; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (251 aa)
   
   
  0.678
RSAG_01057
Uncharacterized protein (641 aa)
   
 
  0.636
RSAG_01040
Uncharacterized protein (666 aa)
   
 
  0.636
RSAG_00957
Uncharacterized protein (897 aa)
   
 
  0.636
RSAG_03417
Uncharacterized protein (563 aa)
   
 
  0.634
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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