STRINGSTRING
RSAG_00417 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00417" - Lactase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00417Lactase (1012 aa)    
Predicted Functional Partners:
RSAG_00180
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (353 aa)
 
 
  0.901
RSAG_00416
Sugar (Glycoside-Pentoside-Hexuronide) transporter (465 aa)
 
     
  0.875
RSAG_02427
Uncharacterized protein (733 aa)
       
  0.847
RSAG_02421
Uncharacterized protein (740 aa)
       
  0.847
RSAG_00418
Uncharacterized protein (275 aa)
 
     
  0.815
RSAG_01527
Uncharacterized protein (412 aa)
 
   
  0.813
RSAG_01985
UDP-glucose 4-epimerase (338 aa)
       
  0.813
RSAG_00337
Uncharacterized protein (291 aa)
   
 
  0.776
RSAG_03198
Beta-galactosidase (674 aa)
   
 
  0.776
RSAG_01535
Uncharacterized protein (692 aa)
   
 
  0.776
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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