STRINGSTRING
RSAG_00469 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00469" - IS605 OrfB family transposase in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00469IS605 OrfB family transposase (442 aa)    
Predicted Functional Partners:
RSAG_00470
Uncharacterized protein (143 aa)
 
   
  0.873
RSAG_01501
Uncharacterized protein (696 aa)
   
          0.628
RSAG_03335
Uncharacterized protein (99 aa)
 
   
  0.588
RSAG_00429
Uncharacterized protein (143 aa)
 
   
  0.575
RSAG_04599
Uncharacterized protein (125 aa)
 
   
  0.544
RSAG_00468
Uncharacterized protein (117 aa)
              0.526
RSAG_02049
Uncharacterized protein (985 aa)
   
          0.497
RSAG_03511
Uncharacterized protein (156 aa)
   
   
  0.482
RSAG_02967
Uncharacterized protein (135 aa)
   
   
  0.482
RSAG_02445
Uncharacterized protein (96 aa)
   
   
  0.482
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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