STRINGSTRING
RSAG_00473 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00473" - Histidine kinase in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00473Histidine kinase (425 aa)    
Predicted Functional Partners:
RSAG_00474
Uncharacterized protein (234 aa)
 
          0.950
RSAG_00578
Uncharacterized protein (233 aa)
 
          0.635
RSAG_03190
Uncharacterized protein (247 aa)
 
          0.605
RSAG_00952
No annotation available (154 aa)
   
          0.544
RSAG_01127
Uncharacterized protein (233 aa)
   
          0.459
RSAG_00472
Uncharacterized protein (116 aa)
              0.459
RSAG_00476
Uncharacterized protein (262 aa)
 
          0.449
RSAG_01674
Uncharacterized protein (344 aa)
   
          0.441
RSAG_00475
Uncharacterized protein (238 aa)
              0.438
RSAG_04669
Uncharacterized protein (473 aa)
   
          0.420
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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