STRINGSTRING
RSAG_00491 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00491" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00491Uncharacterized protein (175 aa)    
Predicted Functional Partners:
RSAG_03369
Uncharacterized protein (170 aa)
 
            0.899
RSAG_00490
Uncharacterized protein (184 aa)
              0.859
RSAG_00492
No annotation available (47 aa)
              0.856
RSAG_02444
Uncharacterized protein (313 aa)
 
    0.816
RSAG_02403
Uncharacterized protein (439 aa)
 
        0.782
RSAG_00489
No annotation available (87 aa)
              0.775
RSAG_01453
Uncharacterized protein (142 aa)
 
            0.747
tsf
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (312 aa)
   
        0.724
RSAG_02443
Uncharacterized protein (282 aa)
 
    0.718
cobB
Regulatory protein SIR2 homolog ; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form (240 aa)
   
    0.549
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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