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RSAG_00495 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00495" - Pseudouridine synthase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00495Pseudouridine synthase (255 aa)    
Predicted Functional Partners:
RSAG_00497
Uncharacterized protein (300 aa)
     
      0.876
RSAG_00498
Uncharacterized protein (124 aa)
              0.859
RSAG_00496
Uncharacterized protein (685 aa)
              0.859
RSAG_00112
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (304 aa)
 
  0.849
RSAG_00013
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (341 aa)
   
  0.816
RSAG_01390
Uncharacterized protein (233 aa)
 
  0.765
RSAG_01288
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (299 aa)
 
  0.759
RSAG_00696
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (349 aa)
 
  0.757
RSAG_00005
RsmD family RNA methyltransferase (189 aa)
 
        0.734
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (295 aa)
 
   
  0.695
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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