STRINGSTRING
RSAG_00496 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00496" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00496Uncharacterized protein (685 aa)    
Predicted Functional Partners:
RSAG_00497
Uncharacterized protein (300 aa)
 
          0.972
RSAG_00498
Uncharacterized protein (124 aa)
 
          0.931
RSAG_00495
Pseudouridine synthase (255 aa)
              0.859
RSAG_01078
Uncharacterized protein (90 aa)
   
          0.700
RSAG_02674
Uncharacterized protein (348 aa)
   
          0.665
RSAG_02243
Uncharacterized protein (107 aa)
   
          0.658
RSAG_01710
Uncharacterized protein (256 aa)
   
          0.624
RSAG_02628
Uncharacterized protein (415 aa)
   
          0.602
RSAG_02120
Uncharacterized protein (730 aa)
   
          0.586
RSAG_02945
Uncharacterized protein (85 aa)
   
          0.567
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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