STRINGSTRING
RSAG_00515 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00515" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00515Uncharacterized protein (193 aa)    
Predicted Functional Partners:
RSAG_00514
Histidine-tRNA ligase (418 aa)
              0.866
RSAG_02549
Diguanylate cyclase (GGDEF) domain-containing protein (582 aa)
 
 
  0.753
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (525 aa)
         
  0.727
RSAG_02259
Diguanylate cyclase (GGDEF) domain-containing protein (600 aa)
   
 
  0.711
RSAG_00089
Diguanylate cyclase (GGDEF) domain-containing protein (650 aa)
   
 
  0.706
RSAG_02531
Diguanylate cyclase (GGDEF) domain-containing protein (596 aa)
   
 
  0.682
RSAG_02776
Uncharacterized protein (634 aa)
   
 
  0.675
RSAG_01568
Diguanylate cyclase (GGDEF) domain-containing protein (575 aa)
   
 
  0.665
RSAG_00516
Coproporphyrinogen dehydrogenase HemZ (395 aa)
              0.650
RSAG_00512
Uncharacterized protein (252 aa)
 
          0.644
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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