STRINGSTRING
RSAG_00526 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00526" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00526Uncharacterized protein (427 aa)    
Predicted Functional Partners:
RSAG_01355
Uncharacterized protein (1517 aa)
   
   
  0.883
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (525 aa)
   
 
    0.642
RSAG_01855
Inosine-5’-monophosphate dehydrogenase (485 aa)
   
 
    0.621
RSAG_03420
Uncharacterized protein (248 aa)
     
 
    0.610
RSAG_01950
Uncharacterized protein (265 aa)
     
 
    0.610
RSAG_00780
3-oxoacyl-[acyl-carrier-protein] reductase (246 aa)
     
 
    0.610
RSAG_03050
DNA topoisomerase (ATP-hydrolyzing) (664 aa)
 
   
  0.525
dnaJ
Chaperone protein DnaJ ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (395 aa)
 
        0.511
RSAG_03479
Cytidine deaminase (147 aa)
 
          0.510
gyrB
DNA gyrase subunit B ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (641 aa)
 
   
  0.472
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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