STRINGSTRING
RSAG_00527 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00527" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00527Uncharacterized protein (199 aa)    
Predicted Functional Partners:
RSAG_00183
Uncharacterized protein (281 aa)
   
          0.601
RSAG_01871
Uncharacterized protein (432 aa)
   
          0.530
RSAG_00828
Uncharacterized protein (125 aa)
   
          0.528
RSAG_00510
Uncharacterized protein (481 aa)
   
          0.518
RSAG_00508
Uncharacterized protein (673 aa)
   
          0.510
RSAG_00528
Uncharacterized protein (254 aa)
              0.462
RSAG_00626
Ribose-phosphate diphosphokinase (416 aa)
 
          0.459
RSAG_00847
Uncharacterized protein (409 aa)
   
          0.457
RSAG_03161
Uncharacterized protein (319 aa)
   
          0.452
RSAG_02920
Cell division protein FtsX ; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation (301 aa)
   
        0.447
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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