STRINGSTRING
RSAG_00537 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00537" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00537Uncharacterized protein (445 aa)    
Predicted Functional Partners:
RSAG_00538
Uncharacterized protein (227 aa)
 
          0.979
RSAG_00539
Uncharacterized protein (526 aa)
 
          0.946
RSAG_02766
Uncharacterized protein (234 aa)
 
          0.824
RSAG_00542
Uncharacterized protein (98 aa)
 
          0.817
RSAG_00543
Uncharacterized protein (113 aa)
 
          0.812
RSAG_00548
Uncharacterized protein (125 aa)
   
          0.773
RSAG_02773
Uncharacterized protein (125 aa)
   
          0.767
RSAG_00545
Uncharacterized protein (246 aa)
   
          0.766
RSAG_01351
Uncharacterized protein (63 aa)
   
          0.612
RSAG_01481
Uncharacterized protein (124 aa)
   
          0.593
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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