STRINGSTRING
RSAG_00538 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00538" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00538Uncharacterized protein (227 aa)    
Predicted Functional Partners:
RSAG_00537
Uncharacterized protein (445 aa)
 
          0.979
RSAG_00539
Uncharacterized protein (526 aa)
 
   
  0.952
RSAG_03249
Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (442 aa)
   
  0.849
RSAG_02765
Uncharacterized protein (449 aa)
 
          0.839
RSAG_00542
Uncharacterized protein (98 aa)
 
          0.818
RSAG_00543
Uncharacterized protein (113 aa)
 
          0.799
RSAG_00545
Uncharacterized protein (246 aa)
 
          0.754
RSAG_00548
Uncharacterized protein (125 aa)
   
          0.752
RSAG_02773
Uncharacterized protein (125 aa)
   
          0.717
RSAG_03070
Uncharacterized protein (555 aa)
         
  0.695
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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