STRINGSTRING
RSAG_00550 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00550" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00550Uncharacterized protein (69 aa)    
Predicted Functional Partners:
RSAG_00551
Uncharacterized protein (271 aa)
 
          0.927
RSAG_00552
Uncharacterized protein (79 aa)
 
          0.903
RSAG_00549
Uncharacterized protein (399 aa)
 
          0.896
RSAG_00534
Uncharacterized protein (399 aa)
 
          0.787
RSAG_00584
Uncharacterized protein (146 aa)
   
          0.778
RSAG_00570
No annotation available (52 aa)
   
          0.777
RSAG_00553
No annotation available (139 aa)
              0.662
RSAG_00121
Uncharacterized protein (226 aa)
   
          0.607
RSAG_00806
Sigma-70 family RNA polymerase sigma factor (139 aa)
   
          0.606
RSAG_00556
Arsenical-resistance protein (247 aa)
              0.540
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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