STRINGSTRING
RSAG_00562 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00562" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00562Uncharacterized protein (119 aa)    
Predicted Functional Partners:
RSAG_00561
Heavy metal translocating P-type ATPase (784 aa)
 
   
  0.876
RSAG_00555
Uncharacterized protein (137 aa)
   
   
  0.766
RSAG_00556
Arsenical-resistance protein (247 aa)
         
  0.756
RSAG_00560
Uncharacterized protein (172 aa)
              0.635
RSAG_00558
Uncharacterized protein (514 aa)
         
  0.633
RSAG_00557
Succinate dehydrogenase and fumarate reductase iron-sulfur protein (233 aa)
              0.631
RSAG_00559
Uncharacterized protein (179 aa)
              0.621
RSAG_00182
Threonine synthase (496 aa)
       
    0.608
RSAG_02285
Chlorophyll synthesis pathway, bchC (342 aa)
         
    0.603
RSAG_01948
Chlorophyll synthesis pathway, bchC (338 aa)
         
    0.603
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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