STRINGSTRING
RSAG_00580 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00580" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00580Uncharacterized protein (396 aa)    
Predicted Functional Partners:
RSAG_00581
Uncharacterized protein (64 aa)
              0.859
RSAG_00312
Uncharacterized protein (118 aa)
   
          0.737
RSAG_00309
Uncharacterized protein (777 aa)
 
          0.735
RSAG_00321
Uncharacterized protein (329 aa)
   
          0.720
RSAG_01351
Uncharacterized protein (63 aa)
   
          0.703
RSAG_00318
Uncharacterized protein (109 aa)
   
          0.698
RSAG_00307
SrtB family sortase (257 aa)
 
          0.692
RSAG_02773
Uncharacterized protein (125 aa)
   
          0.665
RSAG_00316
Uncharacterized protein (257 aa)
   
          0.654
RSAG_00311
Uncharacterized protein (278 aa)
 
          0.650
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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