STRINGSTRING
RSAG_00600 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00600" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00600Uncharacterized protein (299 aa)    
Predicted Functional Partners:
RSAG_00599
Uncharacterized protein (605 aa)
 
          0.977
RSAG_02733
Uncharacterized protein (452 aa)
 
          0.843
RSAG_03103
Amino acid adenylation domain-containing protein (491 aa)
   
 
  0.661
RSAG_00947
Amino acid adenylation domain-containing protein (2996 aa)
   
 
  0.661
RSAG_02527
Uncharacterized protein (514 aa)
     
 
    0.641
RSAG_03473
Uncharacterized protein (519 aa)
   
 
    0.633
RSAG_02207
Uncharacterized protein (395 aa)
   
 
    0.633
dapL
LL-diaminopimelate aminotransferase ; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate, a reaction that requires three enzymes in E.coli (404 aa)
   
 
    0.633
RSAG_02465
NAD+ synthetase (638 aa)
     
 
  0.616
RSAG_01406
Uncharacterized protein (428 aa)
     
 
    0.611
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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