STRINGSTRING
RSAG_00621 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00621" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00621Uncharacterized protein (275 aa)    
Predicted Functional Partners:
RSAG_01355
Uncharacterized protein (1517 aa)
   
 
  0.928
RSAG_02219
Aldehyde-alcohol dehydrogenase (885 aa)
   
  0.847
RSAG_00180
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (353 aa)
   
    0.740
RSAG_02285
Chlorophyll synthesis pathway, bchC (342 aa)
   
  0.738
RSAG_01948
Chlorophyll synthesis pathway, bchC (338 aa)
   
  0.738
RSAG_00662
Uncharacterized protein (339 aa)
   
  0.738
RSAG_01776
Uncharacterized protein (389 aa)
   
  0.737
RSAG_01847
Uncharacterized protein (394 aa)
       
  0.737
RSAG_01093
Uncharacterized protein (329 aa)
   
  0.726
RSAG_00596
Uncharacterized protein (167 aa)
          0.705
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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