STRINGSTRING
RSAG_00625 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00625" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00625Uncharacterized protein (460 aa)    
Predicted Functional Partners:
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (441 aa)
              0.914
plsY
Lysophosphatidic acid synthase ; Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (214 aa)
              0.879
gpsA
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (339 aa)
              0.850
RSAG_00095
Radical SAM-linked protein (246 aa)
   
          0.654
RSAG_00094
Uncharacterized protein (623 aa)
 
          0.611
RSAG_00626
Ribose-phosphate diphosphokinase (416 aa)
              0.499
RSAG_02151
DNA polymerase III, delta subunit (328 aa)
   
          0.457
RSAG_03300
Uncharacterized protein (302 aa)
              0.438
RSAG_03284
1-acyl-sn-glycerol-3-phosphate acyltransferase (237 aa)
              0.438
RSAG_03133
1-acyl-sn-glycerol-3-phosphate acyltransferase (248 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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