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rnhB protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"rnhB" - Ribonuclease HII in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnhBRibonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (251 aa)    
Predicted Functional Partners:
RSAG_00631
Signal peptidase I (201 aa)
   
   
  0.916
RSAG_00630
Ribosome biogenesis GTPase A ; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (283 aa)
   
   
  0.899
RSAG_03270
Poly(A) polymerase (441 aa)
   
 
  0.858
RSAG_01228
DNA polymerase I (849 aa)
 
 
  0.849
RSAG_03036
DUTP diphosphatase (170 aa)
   
        0.826
rplS
50S ribosomal protein L19 ; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (115 aa)
 
   
  0.808
RSAG_00096
Rne/Rng family ribonuclease (398 aa)
     
  0.794
RSAG_02996
Uncharacterized protein (208 aa)
 
            0.769
RSAG_00628
UPF0102 protein RSAG_00628 (121 aa)
   
      0.759
pheT
Phenylalanyl-tRNA synthetase beta subunit (805 aa)
   
   
  0.740
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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