STRINGSTRING
RSAG_00641 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00641" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00641Uncharacterized protein (234 aa)    
Predicted Functional Partners:
RSAG_02109
ATP-dependent Clp protease ATP-binding subunit ClpX ; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (472 aa)
   
  0.929
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX ; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (438 aa)
   
  0.929
RSAG_02829
Anti-sigma F factor antagonist (109 aa)
   
     
  0.779
RSAG_00770
Stage III sporulation protein AA (312 aa)
   
        0.777
RSAG_00172
Sporulation protein YqfD (394 aa)
   
          0.772
RSAG_00381
RNA polymerase sigma factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (259 aa)
   
     
  0.766
RSAG_03196
Stage V sporulation protein T (182 aa)
   
     
  0.765
RSAG_03277
Stage II sporulation protein E (497 aa)
   
   
  0.764
RSAG_00380
YlmC/YmxH family sporulation protein (84 aa)
 
          0.764
RSAG_00751
Stage IV sporulation protein B (409 aa)
 
   
  0.763
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (8%) [HD]