STRINGSTRING
RSAG_00643 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00643" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00643Uncharacterized protein (459 aa)    
Predicted Functional Partners:
RSAG_01355
Uncharacterized protein (1517 aa)
   
   
  0.883
RSAG_00642
Probable transcriptional regulatory protein RSAG_00642 (243 aa)
         
  0.778
RSAG_01855
Inosine-5’-monophosphate dehydrogenase (485 aa)
 
 
    0.686
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (525 aa)
   
 
    0.642
RSAG_03420
Uncharacterized protein (248 aa)
     
 
    0.610
RSAG_01950
Uncharacterized protein (265 aa)
     
 
    0.610
RSAG_00780
3-oxoacyl-[acyl-carrier-protein] reductase (246 aa)
     
 
    0.610
RSAG_00644
mRNA interferase ; Toxic component of a toxin-antitoxin (TA) module (118 aa)
              0.571
dnaJ
Chaperone protein DnaJ ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (395 aa)
 
        0.549
RSAG_03479
Cytidine deaminase (147 aa)
 
          0.507
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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