STRINGSTRING
RSAG_00663 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00663" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00663Uncharacterized protein (134 aa)    
Predicted Functional Partners:
RSAG_01516
Sulfate ABC transporter, permease CysT (278 aa)
     
  0.953
RSAG_01538
Uncharacterized protein (278 aa)
 
  0.897
RSAG_02740
Uncharacterized protein (276 aa)
 
  0.897
RSAG_01909
PTS system, beta-glucoside-specific IIABC component ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (628 aa)
     
 
  0.889
RSAG_02298
Uncharacterized protein (279 aa)
 
  0.885
RSAG_03408
Uncharacterized protein (291 aa)
   
  0.880
RSAG_02741
Uncharacterized protein (293 aa)
   
  0.880
RSAG_02514
Uncharacterized protein (293 aa)
   
  0.880
RSAG_02424
Uncharacterized protein (300 aa)
   
  0.880
RSAG_02297
Uncharacterized protein (302 aa)
   
  0.880
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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