STRINGSTRING
RSAG_00664 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00664" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00664Uncharacterized protein (240 aa)    
Predicted Functional Partners:
RSAG_00604
Uncharacterized protein (195 aa)
          0.886
RSAG_00606
Uncharacterized protein (338 aa)
 
          0.868
RSAG_00663
Uncharacterized protein (134 aa)
 
          0.802
RSAG_01507
Uncharacterized protein (505 aa)
 
          0.683
RSAG_00662
Uncharacterized protein (339 aa)
              0.542
RSAG_02171
Uncharacterized protein (574 aa)
 
          0.538
RSAG_02096
Uncharacterized protein (353 aa)
 
          0.537
RSAG_03000
Uncharacterized protein (255 aa)
          0.537
RSAG_00049
Hydrogenase, Fe-only (562 aa)
 
          0.530
RSAG_03513
Uncharacterized protein (126 aa)
              0.431
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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