STRINGSTRING
RSAG_00669 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00669" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00669Uncharacterized protein (99 aa)    
Predicted Functional Partners:
RSAG_00668
Uncharacterized protein (95 aa)
 
          0.947
RSAG_01776
Uncharacterized protein (389 aa)
   
          0.726
RSAG_01768
Uncharacterized protein (182 aa)
   
          0.715
RSAG_01773
Uncharacterized protein (100 aa)
   
          0.711
RSAG_02975
Uncharacterized protein (886 aa)
   
          0.679
RSAG_01756
Uncharacterized protein (361 aa)
   
          0.582
RSAG_01762
Uncharacterized protein (539 aa)
   
          0.574
RSAG_01778
L-ribulose-5-phosphate 4-epimerase (287 aa)
   
          0.507
RSAG_01769
Uncharacterized protein (451 aa)
   
          0.491
RSAG_04683
Uncharacterized protein (472 aa)
   
          0.490
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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