STRINGSTRING
RSAG_00687 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00687" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00687Uncharacterized protein (200 aa)    
Predicted Functional Partners:
lysS
Lysyl-tRNA synthetase (678 aa)
            0.757
RSAG_00688
Uncharacterized protein (173 aa)
              0.613
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (755 aa)
              0.438
RSAG_00686
Uncharacterized protein (198 aa)
              0.432
RSAG_00685
Uncharacterized protein (831 aa)
              0.432
RSAG_01734
Maf-like protein RSAG_01734 (197 aa)
              0.431
RSAG_00139
DNA repair protein RadC (239 aa)
              0.431
RSAG_00072
Uncharacterized protein (160 aa)
              0.431
RSAG_03268
Uncharacterized protein (163 aa)
              0.420
RSAG_00684
Uncharacterized protein (285 aa)
              0.410
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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