STRINGSTRING
RSAG_00696 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00696" - Pseudouridine synthase in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00696Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (349 aa)    
Predicted Functional Partners:
RSAG_00700
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (375 aa)
   
  0.856
RSAG_00495
Pseudouridine synthase (255 aa)
 
  0.757
RSAG_00234
No annotation available (323 aa)
 
  0.740
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (164 aa)
       
    0.688
RSAG_00695
Ketopantoate reductase ; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (311 aa)
              0.625
RSAG_01949
Uncharacterized protein (337 aa)
   
 
    0.610
RSAG_01943
Uncharacterized protein (370 aa)
   
 
    0.610
RSAG_01544
Uncharacterized protein (358 aa)
   
 
    0.610
RSAG_00350
Uncharacterized protein (324 aa)
   
 
    0.610
gmk
GMP kinase ; Essential for recycling GMP and indirectly, cGMP (207 aa)
 
        0.610
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (11%) [HD]