STRINGSTRING
RSAG_00703 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00703" - D-galactosyl-beta-1-3-N-acetyl-D-hexosamine phosphorylase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00703D-galactosyl-beta-1-3-N-acetyl-D-hexosamine phosphorylase (718 aa)    
Predicted Functional Partners:
RSAG_02515
Carbohydrate ABC transporter substrate-binding protein (448 aa)
 
          0.859
RSAG_00704
Uncharacterized protein (279 aa)
 
          0.806
RSAG_01986
Uncharacterized protein (366 aa)
 
          0.789
RSAG_02513
Uncharacterized protein (275 aa)
 
          0.682
RSAG_02514
Uncharacterized protein (293 aa)
 
          0.633
RSAG_02425
Uncharacterized protein (274 aa)
 
          0.555
RSAG_01988
Uncharacterized protein (292 aa)
 
          0.549
RSAG_02424
Uncharacterized protein (300 aa)
 
          0.523
RSAG_01685
Uncharacterized protein (292 aa)
 
          0.494
RSAG_03409
Uncharacterized protein (278 aa)
              0.438
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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