STRINGSTRING
RSAG_00716 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00716" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00716Uncharacterized protein (222 aa)    
Predicted Functional Partners:
RSAG_01427
Uncharacterized protein (546 aa)
  0.988
RSAG_01993
Uncharacterized protein (447 aa)
  0.988
RSAG_02158
Uncharacterized protein (483 aa)
  0.983
RSAG_01829
Uncharacterized protein (470 aa)
  0.977
RSAG_00367
Uncharacterized protein (494 aa)
  0.968
RSAG_01693
Uncharacterized protein (393 aa)
  0.946
RSAG_02666
Uncharacterized protein (227 aa)
  0.936
RSAG_04548
Uncharacterized protein (383 aa)
  0.932
RSAG_02973
Uncharacterized protein (289 aa)
  0.915
RSAG_00810
Histidine kinase (429 aa)
 
  0.906
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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