STRINGSTRING
RSAG_00728 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00728" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00728Uncharacterized protein (456 aa)    
Predicted Functional Partners:
RSAG_01033
HI0933 family flavoprotein (431 aa)
   
        0.466
RSAG_00141
HI0933 family flavoprotein (396 aa)
   
        0.466
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (426 aa)
   
        0.456
RSAG_02135
TIGR00159 family protein (296 aa)
              0.438
RSAG_02134
Uncharacterized protein (440 aa)
              0.438
RSAG_00843
Adenylosuccinase (479 aa)
              0.438
RSAG_00170
Uncharacterized protein (336 aa)
              0.438
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (164 aa)
              0.438
RSAG_00165
5-formyltetrahydrofolate cyclo-ligase (185 aa)
              0.422
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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