STRINGSTRING
RSAG_00789 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00789" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00789Uncharacterized protein (91 aa)    
Predicted Functional Partners:
RSAG_00802
Uncharacterized protein (121 aa)
 
     
  0.872
RSAG_00788
Uncharacterized protein (51 aa)
              0.866
gpr
Spore protease ; Initiates the rapid degradation of small, acid-soluble proteins during spore germination (304 aa)
   
          0.650
RSAG_00766
Stage III sporulation protein AE (409 aa)
   
          0.642
RSAG_00763
Uncharacterized protein (230 aa)
   
          0.592
RSAG_03277
Stage II sporulation protein E (497 aa)
   
          0.564
RSAG_02837
Uncharacterized protein (139 aa)
   
          0.563
RSAG_00641
Uncharacterized protein (234 aa)
   
          0.557
RSAG_00172
Sporulation protein YqfD (394 aa)
   
          0.512
RSAG_00836
RNA polymerase sigma factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (238 aa)
   
          0.510
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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