STRINGSTRING
RSAG_00795 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00795" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00795Uncharacterized protein (165 aa)    
Predicted Functional Partners:
RSAG_00797
YgiT-type zinc finger domain-containing protein (75 aa)
              0.859
RSAG_00796
Uncharacterized protein (106 aa)
              0.859
lexA
LexA repressor ; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair (206 aa)
 
            0.717
RSAG_00798
Uncharacterized protein (155 aa)
              0.715
RSAG_00794
Uncharacterized protein (77 aa)
              0.600
RSAG_02794
Uncharacterized protein (366 aa)
   
          0.478
RSAG_00799
Uncharacterized protein (276 aa)
              0.463
RSAG_04759
Uncharacterized protein (54 aa)
              0.428
RSAG_00792
No annotation available (46 aa)
              0.428
RSAG_04758
Uncharacterized protein (99 aa)
              0.428
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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