STRINGSTRING
RSAG_00825 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00825" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00825Uncharacterized protein (66 aa)    
Predicted Functional Partners:
RSAG_00820
Uncharacterized protein (163 aa)
 
          0.725
RSAG_00824
Uncharacterized protein (137 aa)
              0.645
RSAG_02160
Toxin secretion/phage lysis holin (147 aa)
   
          0.570
RSAG_00819
Uncharacterized protein (131 aa)
 
          0.525
RSAG_03371
Uncharacterized protein (507 aa)
   
          0.469
RSAG_03382
Uncharacterized protein (653 aa)
   
          0.464
RSAG_02780
Uncharacterized protein (192 aa)
   
          0.454
RSAG_00823
Uncharacterized protein (410 aa)
 
          0.447
RSAG_02083
Uncharacterized protein (57 aa)
   
          0.439
RSAG_00022
Uncharacterized protein (365 aa)
   
          0.410
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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